Lines Matching refs:seq
19 let mut seq = String::with_capacity(51 * (1 << 20));
20 io::stdin().read_to_string(&mut seq).unwrap();
21 let ilen = seq.len();
23 seq = regex!(">[^\n]*\n|\n").replace_all(&seq, "").into_owned();
24 let clen = seq.len();
25 let seq_arc = Arc::new(seq.clone());
40 let seq = seq_arc.clone();
42 let future = thread::spawn(move || variant.find_iter(&seq).count());
59 let mut seq = seq;
61 seq = re.replace_all(&seq, replacement).into_owned();
67 println!("\n{}\n{}\n{}", ilen, clen, seq.len());