Lines Matching defs:scaffIndex
392 int *scaffIndex;
5307 if (dtd->scaffIndex) {
5319 parser, dtd->scaffIndex, parser->m_groupSize * sizeof(int));
5322 dtd->scaffIndex = new_scaff_index;
5338 assert(dtd->scaffIndex != NULL);
5339 dtd->scaffIndex[dtd->scaffLevel] = myindex;
5358 && (dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
5360 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
5504 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
5570 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel]].quant = quant;
6731 p->scaffIndex = NULL;
6770 ms->free_fcn(p->scaffIndex);
6771 p->scaffIndex = NULL;
6806 ms->free_fcn(p->scaffIndex);
6936 newDtd->scaffIndex = oldDtd->scaffIndex;
7428 if (! dtd->scaffIndex) {
7429 dtd->scaffIndex = (int *)MALLOC(parser, parser->m_groupSize * sizeof(int));
7430 if (! dtd->scaffIndex)
7432 dtd->scaffIndex[0] = 0;
7470 = &dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]];